samuell/gccontent-benchmark
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Benchmarking different languages for a simple bioinformatics task (Counting the GC fraction of DNA in a FASTA file)
5 mentions on Hacker News by 2 people: 2 stories, 3 comments · first 2021-02-20 · latest 2023-09-07
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…as infile: ... "open" must be one of the most used Python functions ... :/ [1] https://github.com/samuell/gccontent-benchmark
comment by samuell · 2023-09-07 · in Mojo is available for local download -
…counting the fraction of G:s and C:s in DNA sequences, compared to all the A:s, C:s, G:s and T:s)? https://github.com/samuell/gccontent-benchmark :D
comment by samuell · 2022-12-16 · in OCaml 5.0 Multicore is out -
…(calculating the ratio of G and Cs against A+G+C+T), also with a whole bunch of contributors: https://github.com/samuell/gccontent-benchmark#readme Really hard - or impossible - to arrive at a definitive single number for one language, but…
comment by samuell · 2022-07-25 · in Performance comparison: counting words in Python, C/C++, Awk, Rust, and more -
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Benchmarking different programming languages for a simple bioinformatics taskstory by c0deb0t · 2021-03-22 · 1 comment
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Rust tops bioinformatics micro-benchmarkstory by samuell · 2021-02-20 · 1 comment