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neuml/paperetl

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📄 ⚙️ ETL processes for medical and scientific papers

8 mentions on Hacker News by 4 people: 3 stories, 5 comments · first 2021-01-26 · latest 2025-08-17

Mentions per year 8 mentions · busiest year 2023 (3)
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  1. …Python: PyPdf2, PdfMiner.six, Grobid, PyMuPdf; pytesseract (C++) paperetl is built on grobid: https://github.com/neuml/paperetl annotateai: https://github.com/neuml/annotateai : > annotateai automatically annotates papers using Large…
    comment by westurner · 2025-08-17 · in Llama-Scan: Convert PDFs to Text W Local LLMs
  2. …enable RAG over medical literature for a while. PaperAI: https://github.com/neuml/paperai PaperETL: https://github.com/neuml/paperetl There is also this tool that annotates papers inline. AnnotateAI: https://github.com/neuml/annotateai
    comment by dmezzetti · 2025-07-09 · in Biomni: A General-Purpose Biomedical AI Agent
  3. …for medical/scientific papers. Built on txtai ( https://github.com/neuml/txtai ) paperetl ( https://github.com/neuml/paperetl ) - ETL processes for medical and scientific papers. Supports full PDF docs.
    comment by dmezzetti · 2024-12-25 · in Show HN: I made a website to semantically search ArXiv papers
  4. …working with scientific papers: https://github.com/kermitt2/grobid . I use this with paperetl ( https://github.com/neuml/paperetl ).
    comment by dmezzetti · 2024-01-24 · in Show HN: Open-source Rule-based PDF parser for RAG
  5. …quite important. With that, I have a couple projects that might be beneficial additions. paperetl ( https://github.com/neuml/paperetl ) - supports parsing arXiv, PubMed and integrates with GROBID to handle parsing metadata and text from…
    comment by dmezzetti · 2023-11-26 · in Oracle of Zotero: LLM QA of Your Research Library